BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015F05SP1|AL426879
(873 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1201 1711 0.0
>3x_Contig1201
Length = 5468
Score = 1711 bits (862), Expect = 0.0
Identities = 871/874 (99%), Gaps = 1/874 (0%)
Strand = Plus / Minus
Query: 1 gatccatgca-ttgcactacttgtggattctttggagattcgttagctgaggttgtttga 59
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3911 gatccatgcaattgcactacttgtggattctttggagattcgttagctgaggttgtttga 3852
Query: 60 aattttgtttctaatccatcgatgttttggctatatatccttttcacttgattcttttcg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3851 aattttgtttctaatccatcgatgttttggctatatatccttttcacttgattcttttcg 3792
Query: 120 cacagttggttgataaaactgtgatatgcagtaggtttgctagtacatgataaagaatgc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3791 cacagttggttgataaaactgtgatatgcagtaggtttgctagtacatgataaagaatgc 3732
Query: 180 aatttactcattaggctgttgaaagatatcgacatggagtttgacgagtaaacatggtta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3731 aatttactcattaggctgttgaaagatatcgacatggagtttgacgagtaaacatggtta 3672
Query: 240 aaatcaaataaatccttcccagacttgacatttggtgaacttgattttaaagttgtgaat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3671 aaatcaaataaatccttcccagacttgacatttggtgaacttgattttaaagttgtgaat 3612
Query: 300 agcccattcgctgatctgaagtctggaattcctgctgctactgataccccagctccttgg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3611 agcccattcgctgatctgaagtctggaattcctgctgctactgataccccagctccttgg 3552
Query: 360 accaccacgattcgtttcgaataacttaacacgtatgtwaaaaattcagcatcttttgat 419
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3551 accaccacgattcgtttcgaataacttaacacgtatgttaaaaattcagcatcttttgat 3492
Query: 420 gagctcttggcagatccctcaacataattatccaaaggaaaaacagtatccagttctggt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3491 gagctcttggcagatccctcaacataattatccaaaggaaaaacagtatccagttctggt 3432
Query: 480 ctatatttcagtcttggttttcttgttgtctgcggcaaactgcgagtagtaggcgaatcg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3431 ctatatttcagtcttggttttcttgttgtctgcggcaaactgcgagtagtaggcgaatcg 3372
Query: 540 catagtttcttcttccgagatggtgactttttaactctacttaaatcatttataagcttt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3371 catagtttcttcttccgagatggtgactttttaactctacttaaatcatttataagcttt 3312
Query: 600 cttggcttgatagacagttctttgagatcacccgctttcaaatcatgtttctttaccgat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3311 cttggcttgatagacagttctttgagatcacccgctttcaaatcatgtttctttaccgat 3252
Query: 660 gacgatggaggagtcagtagttgatggtactctttcctaactggagactccattattaat 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3251 gacgatggaggagtcagtagttgatggtactctttcctaactggagactccattattaat 3192
Query: 720 gcttatgcagtggaaatccttaccttaaaactttgtcagatttattctaccctttcaatg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3191 gcttatgcagtggaaatccttaccttaaaactttgtcagatttattctaccctttcaatg 3132
Query: 780 acttacagtaataacgtactcagaaccacaaagatacgataccagtaaatcacactcagt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3131 acttacagtaataacgtactcagaaccacaaagatacgataccagtaaatcacactcagt 3072
Query: 840 caggtcatatatgtwtaaatatatatatatatgt 873
|||||||||||||| |||||||||||||||||||
Sbjct: 3071 caggtcatatatgtataaatatatatatatatgt 3038
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,313
Number of Sequences: 1807
Number of extensions: 10313
Number of successful extensions: 395
Number of sequences better than 1.0e-20: 1
length of query: 873
length of database: 10,358,551
effective HSP length: 16
effective length of query: 857
effective length of database: 10,329,639
effective search space: 8852500623
effective search space used: 8852500623
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)